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    sowah sosondowah [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39438, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sowahprovided by FlyBase
    Official Full Name
    sosondowahprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036302
    Locus tag
    Dmel_CG10632
    See related
    AllianceGenome:FB:FBgn0036302
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GM09162; CG10632; Dmel\CG10632; Sowah
    Summary
    Orthologous to several human genes including SOWAHB (sosondowah ankyrin repeat domain family member B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See sowah in Genome Data Viewer
    Location:
    69C6-69C8; 3-38 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (12537513..12572542, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (12530613..12565642, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43612 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Phosphomannomutase type 2 Neighboring gene araucan Neighboring gene caupolican

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary history of the iroquois/Irx genes in metazoans. Kerner P, et al. BMC Evol Biol, 2009 Apr 15. PMID 19368711, Free PMC Article
    2. Convergent evolution of clustering of Iroquois homeobox genes across metazoans. Irimia M, et al. Mol Biol Evol, 2008 Aug. PMID 18469332
    3. Novel perspectives of target-binding by the evolutionarily conserved PP4 phosphatase. Karman Z, et al. Open Biol, 2020 Dec. PMID 33352067, Free PMC Article
    4. Drosophila Insulin-Like Peptides DILP2 and DILP5 Differentially Stimulate Cell Signaling and Glycogen Phosphorylase to Regulate Longevity. Post S, et al. Front Endocrinol (Lausanne), 2018. PMID 29892262, Free PMC Article
    5. Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model. Halfon MS, et al. Genome Res, 2002 Jul. PMID 12097338, Free PMC Article

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    sosondowah
    Names
    CG10632-PG
    CG10632-PH
    CG10632-PI
    CG10632-PJ
    sowah-PG
    sowah-PH
    sowah-PI
    sowah-PJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      12537513..12572542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168503.5 → NP_729816.4  sosondowah, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729816.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960W9
      Conserved Domains (3) summary
      cd00204
      Location:315 → 398
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:315 → 368
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:315 → 346
      ANK; ANK repeat [structural motif]

    2. NM_001144469.3 → NP_001137941.2  sosondowah, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137941.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0A9
      Conserved Domains (3) summary
      cd00204
      Location:315 → 398
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:315 → 368
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:315 → 346
      ANK; ANK repeat [structural motif]

    3. NM_001144471.3 → NP_001137943.2  sosondowah, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137943.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0B0
      Conserved Domains (3) summary
      cd00204
      Location:315 → 393
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:315 → 368
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:315 → 346
      ANK; ANK repeat [structural motif]

    4. NM_001144470.3 → NP_001137942.2  sosondowah, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137942.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0B1
      Conserved Domains (3) summary
      cd00204
      Location:315 → 393
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:315 → 368
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:315 → 346
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7Z0A9 B7Z0A9
    B7Z0B0 B7Z0B0
    B7Z0B1 B7Z0B1
    Q8T9J1 Q8T9J1
    Q960W9 Q960W9

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