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    yem yemanuclein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43439, updated on 9-Dec-2024

    Summary

    Official Symbol
    yemprovided by FlyBase
    Official Full Name
    yemanucleinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0005596
    Locus tag
    Dmel_CG14513
    See related
    AllianceGenome:FB:FBgn0005596
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11879; CG14513; Dmel\CG14513; yem-alpha; yema; yemalpha; Yemalpha; yG4.5; yT4.5
    Summary
    Enables DNA binding activity. Involved in chromatin organization and female meiotic nuclear division. Located in germinal vesicle; kinetochore; and male pronucleus. Is expressed in several structures, including embryonic/larval midgut primordium; ganglia; germline cell; gonad; and head epidermis primordium. Orthologous to human UBN1 (ubinuclein 1) and UBN2 (ubinuclein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See yem in Genome Data Viewer
    Location:
    98F10-98F10; 3-97 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29118330..29122879, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24944052..24948601, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene alpha-Mannosidase class I b Neighboring gene Pyruvate dehydrogenase E1 beta subunit Neighboring gene Autophagy-related 14 Neighboring gene Choline transporter-like 2 Neighboring gene dim gamma-tubulin 6

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in chromatin organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in female meiotic nuclear division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in germinal vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in kinetochore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in male pronucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    yemanuclein
    Names
    CG14513-PA
    CG14513-PB
    yem-PA
    yem-PB
    yem-alpha
    yema nuclein alpha
    yema-gene-4.5
    yemalpha
    yemanuclein alpha
    yemanuclein-alpha

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29118330..29122879 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057545.4NP_476893.1  yemanuclein, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476893.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P25992, Q6AWM5, Q9VAP4
      UniProtKB/TrEMBL
      H8F4N7
      Related
      FBpp0084784
      Conserved Domains (2) summary
      pfam08729
      Location:129178
      HUN; HPC2 and ubinuclein domain
      pfam14075
      Location:443633
      UBN_AB; Ubinuclein conserved middle domain
    2. NM_001276125.1NP_001263054.1  yemanuclein, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001263054.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KHA1
      Conserved Domains (2) summary
      pfam08729
      Location:129178
      HUN; HPC2 and ubinuclein domain
      pfam14075
      Location:443633
      UBN_AB; Ubinuclein conserved middle domain