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    CG17211 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34639, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17211provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032414
    Locus tag
    Dmel_CG17211
    See related
    AllianceGenome:FB:FBgn0032414
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17211
    Summary
    Predicted to enable integrin binding activity. Predicted to be involved in epithelial tube morphogenesis. Predicted to be located in extracellular matrix. Predicted to be active in extracellular region. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17211 in Genome Data Viewer
    Location:
    33C4-33D2; 2-46 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12114360..12129896)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12114360..12129896)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Phaedra 1 Neighboring gene Phaedra 2 Neighboring gene rhomboid-6 Neighboring gene Gustatory receptor 33a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Degeneration of Injured Axons and Dendrites Requires Restraint of a Protective JNK Signaling Pathway by the Transmembrane Protein Raw. Hao Y, et al. J Neurosci, 2019 Oct 23. PMID 31492772, Free PMC Article
    2. Defensive repertoire of Drosophila larvae in response to toxic fungi. Trienens M, et al. Mol Ecol, 2017 Oct. PMID 28746736
    3. Evidence for tissue-specific Jak/STAT target genes in Drosophila optic lobe development. Wang H, et al. Genetics, 2013 Dec. PMID 24077308, Free PMC Article
    4. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
    5. Flying toward a plastic-free world: Can Drosophila serve as a model organism to develop new strategies of plastic waste management? Pignataro E, et al. Sci Total Environ, 2024 Mar 1. PMID 38199375

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables integrin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in epithelial tube morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17211-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      12114360..12129896
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135708.2 → NP_609552.1  uncharacterized protein Dmel_CG17211 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609552.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F3YDL4, Q9VKA7
      Related
      FBpp0079918
      Conserved Domains (1) summary
      smart00214
      Location:237 → 294
      VWC; von Willebrand factor (vWF) type C domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VKA7 Q9VKA7

    Gene LinkOut

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