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    CG10681 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39425, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10681provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036291
    Locus tag
    Dmel_CG10681
    See related
    AllianceGenome:FB:FBgn0036291
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10681
    Summary
    Predicted to be involved in lysosome localization. Predicted to be part of BORC complex. Is expressed in organism. Orthologous to human KXD1 (KxDL motif containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10681 in Genome Data Viewer
    Location:
    69C4-69C4; 3-38 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (12501513..12502647)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (12494613..12495747)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45682 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR43868 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene vihar Neighboring gene sticky Neighboring gene long non-coding RNA:CR45168

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-Wide Mapping Targets of the Metazoan Chromatin Remodeling Factor NURF Reveals Nucleosome Remodeling at Enhancers, Core Promoters and Gene Insulators. Kwon SY, et al. PLoS Genet, 2016 Apr. PMID 27046080, Free PMC Article
    2. Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster. Manta AK, et al. Fly (Austin), 2017 Apr 3. PMID 27960592, Free PMC Article
    3. Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila. Meltzer H, et al. Nat Commun, 2019 May 8. PMID 31068592, Free PMC Article
    4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    5. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in lysosome localization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of BORC complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10681-PA
    CG10681-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      12501513..12502647
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274837.1 → NP_001261766.1  uncharacterized protein Dmel_CG10681, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261766.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VTY4
      UniProtKB/TrEMBL
      M9PFF6
      Conserved Domains (1) summary
      pfam10241
      Location:36 → 114
      KxDL; Uncharacterized conserved protein

    2. NM_140323.2 → NP_648580.1  uncharacterized protein Dmel_CG10681, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648580.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VTY4
      UniProtKB/TrEMBL
      M9PFF6
      Related
      FBpp0075689
      Conserved Domains (1) summary
      pfam10241
      Location:36 → 114
      KxDL; Uncharacterized conserved protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PFF6 M9PFF6
    Q9VTY4.1 Q9VTY4

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