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    Vta1 Vesicle trafficking 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38204, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vta1provided by FlyBase
    Official Full Name
    Vesicle trafficking 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0035251
    Locus tag
    Dmel_CG7967
    See related
    AllianceGenome:FB:FBgn0035251
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7967; Dmel\CG7967
    Summary
    Predicted to enable ATPase activator activity. Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway. Predicted to be part of ESCRT IV complex. Predicted to be active in multivesicular body. Is expressed in adult head and organism. Orthologous to human VTA1 (vesicle trafficking 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Vta1 in Genome Data Viewer
    Location:
    62A9-62A10; 3-0.5 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1651432..1652900, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1651432..1652900, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45815 Neighboring gene uncharacterized protein Neighboring gene Brother Neighboring gene uncharacterized protein Neighboring gene Serine-arginine repetitive matrix 2/3/4 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L23A Neighboring gene U snoRNA host gene 7

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ATPase activator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of ESCRT IV complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in multivesicular body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in multivesicular body ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    vesicle trafficking 1
    Names
    CG7967-PA
    Vta1-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1651432..1652900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139383.2NP_647640.1  vesicle trafficking 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647640.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0B3
      Related
      FBpp0072691
      Conserved Domains (2) summary
      pfam04652
      Location:18148
      Vta1; Vta1 like
      pfam18097
      Location:275311
      Vta1_C; Vta1 C-terminal domain