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    CG16959 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39648, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG16959provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036481
    Locus tag
    Dmel_CG16959
    See related
    AllianceGenome:FB:FBgn0036481
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT21630; Dmel\CG16959
    Summary
    Is expressed in several structures, including embryonic esophagus; embryonic head epidermis; embryonic large intestine; primary segmental tracheal branch primordium; and primary tracheal branch. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG16959 in Genome Data Viewer
    Location:
    71B5-71B5; 3-42 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15119878..15125321, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15112978..15118421, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene CTP synthase Neighboring gene antisense RNA:CR43971 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Centrosomal protein 135kDa Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene small Cajal body-specific RNA : MeU5-U42 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila bld10 is a centriolar protein that regulates centriole, basal body, and motile cilium assembly. Mottier-Pavie V, et al. Mol Biol Cell, 2009 May. PMID 19321663, Free PMC Article
    2. A genome-wide RNAi screen reveals multiple regulators of caspase activation. Yi CH, et al. J Cell Biol, 2007 Nov 19. PMID 17998402, Free PMC Article
    3. A Search for Genes Mediating the Growth-Promoting Function of TGFβ in the Drosophila melanogaster Wing Disc. Hevia CF, et al. Genetics, 2017 May. PMID 28315837, Free PMC Article
    4. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    5. Microbiota-induced changes in drosophila melanogaster host gene expression and gut morphology. Broderick NA, et al. mBio, 2014 May 27. PMID 24865556, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG16959-PA
    CG16959-PB
    CG16959-PC
    CG16959-PD
    CG16959-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      15119878..15125321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300140.1 → NP_001287069.1  uncharacterized protein Dmel_CG16959, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287069.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFB1
      Conserved Domains (1) summary
      pfam16033
      Location:292 → 354
      DUF4789; Domain of unknown function (DUF4789)

    2. NM_001274941.1 → NP_001261870.1  uncharacterized protein Dmel_CG16959, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261870.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFB1
      Conserved Domains (1) summary
      pfam16033
      Location:292 → 354
      DUF4789; Domain of unknown function (DUF4789)

    3. NM_168608.3 → NP_730025.1  uncharacterized protein Dmel_CG16959, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730025.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VUL4
      Related
      FBpp0075409
      Conserved Domains (1) summary
      pfam16033
      Location:292 → 354
      DUF4789; Domain of unknown function (DUF4789)

    4. NM_001202180.2 → NP_001189109.1  uncharacterized protein Dmel_CG16959, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189109.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFB1
      Conserved Domains (1) summary
      pfam16033
      Location:292 → 354
      DUF4789; Domain of unknown function (DUF4789)

    5. NM_140493.4 → NP_648750.1  uncharacterized protein Dmel_CG16959, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648750.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VUL4
      Related
      FBpp0075408
      Conserved Domains (1) summary
      pfam16033
      Location:292 → 354
      DUF4789; Domain of unknown function (DUF4789)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PFB1 M9PFB1
    Q9VUL4 Q9VUL4

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