W03F9.4 Choline/carnitine acyltransferase domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: W03F9.4
Official Full Name: Choline/carnitine acyltransferase domain-containing protein
Primary source: WormBase:WBGene00021002
Locus tag: CELE_W03F9.4
See related: AllianceGenome:WB:WBGene00021002
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable carnitine O-palmitoyltransferase activity. Predicted to be involved in carnitine metabolic process and fatty acid metabolic process. Predicted to be located in membrane. Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See W03F9.4 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 5

Sequence:: Chromosome: V; NC_003283.11 (147521..151388, complement)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

W03F9.4 (e-PCR)
- UniSTS:315153

STS5-102 (e-PCR)
- UniSTS:242261

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables acyltransferase activity	IEA Inferred from Electronic Annotation more info
enables carnitine O-palmitoyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in carnitine metabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in fatty acid metabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Choline/carnitine acyltransferase domain-containing protein

NP_001300212.1

Confirmed by transcript evidence

NP_503145.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

147521..151388 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_070744.5 → NP_503145.1 Choline/carnitine acyltransferase domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_503145.1

Status: REVIEWED

UniProtKB/TrEMBL

O16992

Conserved Domains (1) summary

pfam00755
Location:145 → 737

Carn_acyltransf; Choline/Carnitine o-acyltransferase
NM_001313283.3 → NP_001300212.1 Choline/carnitine acyltransferase domain-containing protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A0K3ASC9

Conserved Domains (1) summary

pfam00755
Location:44 → 636

Carn_acyltransf; Choline/Carnitine o-acyltransferase