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    clc-7 Clc-like protein [ Caenorhabditis elegans ]

    Gene ID: 182855, updated on 9-Dec-2024

    Summary

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    Official Symbol
    clc-7
    Official Full Name
    Clc-like protein
    Primary source
    WormBase:WBGene00016067
    Locus tag
    CELE_C24H10.1
    See related
    AllianceGenome:WB:WBGene00016067
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See clc-7 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (5068096..5074447)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene NR LBD domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene EF-hand domain-containing protein Neighboring gene ETS domain-containing protein;ETS domain-containing transcription factor ets-5 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lysosomal chloride transporter CLH-6 protects lysosome membrane integrity via cathepsin activation. Zhang Q, et al. J Cell Biol, 2023 Jun 5. PMID 37058288, Free PMC Article
    2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Clc-like protein
    NP_001370488.2
    • Confirmed by transcript evidence
    NP_001382285.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      5068096..5074447
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383572.2 → NP_001370488.2  Clc-like protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A8D8EJW4
      Conserved Domains (1) summary
      pfam07062
      Location:34 → 244
      Clc-like

    2. NM_001395348.1 → NP_001382285.1  Clc-like protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18135
      Conserved Domains (1) summary
      pfam07062
      Location:11 → 221
      Clc-like
    Nucleotide Protein
    Heading Accession and Version

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