U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C18F10.7 ANK_REP_REGION domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175889, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    C18F10.7
    Official Full Name
    ANK_REP_REGION domain-containing protein
    Primary source
    WormBase:WBGene00015978
    Locus tag
    CELE_C18F10.7
    See related
    AllianceGenome:WB:WBGene00015978
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in late endosome and plasma membrane. Predicted to be active in cytoplasm. Is expressed in several structures, including anal depressor muscle; head mesodermal cell; nervous system; rectal gland cell; and reproductive system. Orthologous to several human genes including ANKRD13B (ankyrin repeat domain 13B). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See C18F10.7 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    8
    Sequence:
    Chromosome: III; NC_003281.10 (6276048..6278351, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene WSN domain-containing protein Neighboring gene High mobility group protein 1.2 Neighboring gene Gastrulation-defective protein 3 Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    ANK_REP_REGION domain-containing protein
    NP_498374.1
    • Confirmed by transcript evidence
    NP_741185.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6276048..6278351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065973.6 → NP_498374.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498374.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18099
      Conserved Domains (3) summary
      sd00045
      Location:12 → 41
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:159 → 458
      GPCR_chapero_1; GPCR-chaperone
      pfam12796
      Location:12 → 74
      Ank_2; Ankyrin repeats (3 copies)

    2. NM_171160.5 → NP_741185.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741185.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MNV2
      Conserved Domains (2) summary
      sd00045
      Location:12 → 41
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:12 → 74
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools