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    srab-16 Serpentine Receptor, class AB (Class A-like);Transposase [ Caenorhabditis elegans ]

    Gene ID: 187865, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srab-16
    Official Full Name
    Serpentine Receptor, class AB (Class A-like);Transposase
    Primary source
    WormBase:WBGene00020060
    Locus tag
    CELE_R13D11.6
    See related
    AllianceGenome:WB:WBGene00020060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in non-motile cilium. Is expressed in nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srab-16 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (782732..784763)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene pseudo Neighboring gene Nuclear Hormone Receptor family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diverse cell type-specific mechanisms localize G protein-coupled receptors to Caenorhabditis elegans sensory cilia. Brear AG, et al. Genetics, 2014 Jun. PMID 24646679, Free PMC Article
    2. Identification of a nematode chemosensory gene family. Chen N, et al. Proc Natl Acad Sci U S A, 2005 Jan 4. PMID 15618405, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Serpentine Receptor, class AB (Class A-like);Transposase
    NP_001300180.1
    • Partially confirmed by transcript evidence
    NP_503325.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      782732..784763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070924.3 → NP_503325.2  Serpentine Receptor, class AB (Class A-like) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503325.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17010
      Conserved Domains (1) summary
      pfam10292
      Location:2 → 324
      7TM_GPCR_Srab; Serpentine type 7TM GPCR receptor class ab chemoreceptor

    2. NM_001313251.1 → NP_001300180.1  Transposase [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ASU2
      Conserved Domains (1) summary
      cl11607
      Location:1 → 40
      7TM_GPCR_Srab; Serpentine type 7TM GPCR receptor class ab chemoreceptor
    Nucleotide Protein
    Heading Accession and Version

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