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    fbxa-189 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185955, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxa-189
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00009840
    Locus tag
    CELE_F47H4.9
    See related
    AllianceGenome:WB:WBGene00009840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxa-189 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (17345214..17347781)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene F-box domain-containing protein Neighboring gene Skp1-related protein Neighboring gene Zinc finger protein lsy-27 Neighboring gene DUF38 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_507392.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      17345214..17347781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074991.2 → NP_507392.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507392.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XU28
      Conserved Domains (3) summary
      smart00256
      Location:278 → 318
      FBOX; A Receptor for Ubiquitination Targets
      pfam01827
      Location:396 → 536
      FTH; FTH domain
      pfam17906
      Location:77 → 126
      HTH_48; HTH domain in Mos1 transposase
    Nucleotide Protein
    Heading Accession and Version

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