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    grl-21 Ground-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177967, updated on 9-Dec-2024

    Summary

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    Official Symbol
    grl-21
    Official Full Name
    Ground-like domain-containing protein
    Primary source
    WormBase:WBGene00001730
    Locus tag
    CELE_ZC168.5
    See related
    AllianceGenome:WB:WBGene00001730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in arcade cell and hypodermis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See grl-21 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (10737474..10738191)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Origin recognition complex subunit 5 C-terminal domain-containing protein Neighboring gene G2/mitotic-specific cyclin-B1 Neighboring gene Sperm-specific class P protein 34 Neighboring gene Cystatin domain-containing protein Neighboring gene Aminotransferase class I/classII large domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Microbial metabolites regulate host lipid metabolism through NR5A-Hedgehog signalling. Lin CJ, et al. Nat Cell Biol, 2017 May. PMID 28436966, Free PMC Article
    2. Muscle-epidermis interactions affect exoskeleton patterning in Caenorhabditis elegans. Broday L, et al. Dev Dyn, 2007 Nov. PMID 17937397
    3. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
    4. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
    5. Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions. Zárate-Potes A, et al. Front Microbiol, 2022. PMID 35620104, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Ground-like domain-containing protein
    NP_501988.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10737474..10738191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069587.8 → NP_501988.1  Ground-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501988.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23248
      Conserved Domains (1) summary
      pfam04155
      Location:98 → 170
      Ground-like; Ground-like domain
    Nucleotide Protein
    Heading Accession and Version

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