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    pals-1 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

    Gene ID: 184528, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pals-1
    Official Full Name
    Protein containing ALS2cr12 (ALS2CR12) signature
    Primary source
    WormBase:WBGene00008858
    Locus tag
    CELE_F15D3.8
    See related
    AllianceGenome:WB:WBGene00008858
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See pals-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (11579856..11581989, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Mitochondrial import inner membrane translocase subunit TIM23 Neighboring gene tRNA-Lys Neighboring gene Sperm transmembrane protein 9 Neighboring gene ncRNA Neighboring gene tRNA-Lys Neighboring gene tRNA-Lys

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mitochondrial dysfunction induces RNA interference in C. elegans through a pathway homologous to the mammalian RIG-I antiviral response. Mao K, et al. PLoS Biol, 2020 Dec. PMID 33264285, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    General protein information

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    Preferred Names
    Protein containing ALS2cr12 (ALS2CR12) signature
    NP_492954.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      11579856..11581989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060553.4 → NP_492954.2  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492954.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62174
      Conserved Domains (1) summary
      pfam15709
      Location:7 → 123
      DUF4670; Domain of unknown function (DUF4670)
    Nucleotide Protein
    Heading Accession and Version

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