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    Tmem221 transmembrane protein 221 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100361931, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Tmem221provided by RGD
    Official Full Name
    transmembrane protein 221provided by RGD
    Primary source
    RGD:2319149
    See related
    EnsemblRapid:ENSRNOG00000018167 AllianceGenome:RGD:2319149
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human TMEM221 (transmembrane protein 221). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 3.6), Testes (RPKM 2.3) and 5 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem221 in Genome Data Viewer
    Location:
    16p14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (18296036..18305077, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (18253622..18271094, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (19984368..19992507, complement)

    Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase like 1 Neighboring gene multivesicular body subunit 12A Neighboring gene nucleoredoxin-like 1 Neighboring gene solute carrier family 27 member 1 Neighboring gene 6-phosphogluconolactonase Neighboring gene niban apoptosis regulator 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transmembrane protein 221
    Names
    rCG38870-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086034.1 Reference GRCr8

      Range
      18296036..18305077 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039094898.2 → XP_038950826.1  transmembrane protein 221 isoform X2

      Related
      ENSRNOP00000100124.1, ENSRNOT00000166744.1
      Conserved Domains (1) summary
      pfam15038
      Location:94 → 186
      Jiraiya

    2. XM_063275927.1 → XP_063131997.1  transmembrane protein 221 isoform X2

    3. XM_063275925.1 → XP_063131995.1  transmembrane protein 221 isoform X1

    4. XM_063275926.1 → XP_063131996.1  transmembrane protein 221 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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