U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    tasor2 transcription activation suppressor family member 2 [ Danio rerio (zebrafish) ]

    Gene ID: 100003721, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    tasor2provided by ZNC
    Official Full Name
    transcription activation suppressor family member 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041111-225
    See related
    Ensembl:ENSDARG00000074168 AllianceGenome:ZFIN:ZDB-GENE-041111-225
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fam208b; im:7145096; wu:fb95d10; wu:fc15g07; si:ch211-204d2.5
    Summary
    Predicted to act upstream of or within negative regulation of gene expression, epigenetic. Predicted to be active in nucleoplasm. Orthologous to human TASOR2 (transcription activation suppressor family member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See tasor2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (11174030..11202152, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (11136328..11164619, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 13b Neighboring gene pleckstrin homology domain containing A2 Neighboring gene unc-45 myosin chaperone B Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta b

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    acts_upstream_of_or_within negative regulation of gene expression, epigenetic IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein TASOR 2; transcription activation suppressor family member 2
    Names
    family with sequence similarity 208, member B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      11174030..11202152 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005166734.5 → XP_005166791.1  protein TASOR 2 isoform X3

      UniProtKB/TrEMBL
      A0A8M2BE90
      Conserved Domains (1) summary
      pfam12509
      Location:60 → 215
      DUF3715; Protein of unknown function (DUF3715)

    2. XM_009303786.4 → XP_009302061.1  protein TASOR 2 isoform X2

      UniProtKB/TrEMBL
      A0A8M3BBL9
      Conserved Domains (1) summary
      pfam12509
      Location:60 → 215
      DUF3715; Protein of unknown function (DUF3715)

    3. XM_009303785.4 → XP_009302060.1  protein TASOR 2 isoform X1

      UniProtKB/TrEMBL
      A0A1L1QZC7, A0A8M3AUY9
      Related
      ENSDARP00000143046.1, ENSDART00000174039.2
      Conserved Domains (1) summary
      pfam12509
      Location:60 → 215
      DUF3715; Protein of unknown function (DUF3715)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.