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    tasora transcription activation suppressor a [ Danio rerio (zebrafish) ]

    Gene ID: 100331431, updated on 4-Jan-2025

    Summary

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    Official Symbol
    tasoraprovided by ZNC
    Official Full Name
    transcription activation suppressor aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6444
    See related
    Ensembl:ENSDARG00000089893 AllianceGenome:ZFIN:ZDB-GENE-030131-6444
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj36a11; fj97g09; fam208aa; wu:fj36a11; wu:fj97g09
    Summary
    Predicted to act upstream of or within negative regulation of gene expression, epigenetic. Orthologous to human TASOR (transcription activation suppressor). [provided by Alliance of Genome Resources, Jan 2025]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    all
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    Genomic context

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    See tasora in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38999116..39034024)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (39012342..39047439)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene sirtuin 7 Neighboring gene retinoblastoma binding protein 9 Neighboring gene Rho guanine nucleotide exchange factor (GEF) 3 Neighboring gene coiled-coil domain containing 66 Neighboring gene inositol hexakisphosphate kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of gene expression, epigenetic IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein TASOR
    Names
    family with sequence similarity 208, member Aa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      38999116..39034024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009296539.4 → XP_009294814.2  protein TASOR

      UniProtKB/TrEMBL
      A0A8M3ANB2
      Related
      ENSDARP00000156023.1, ENSDART00000185958.1
    Nucleotide Protein Strain
    Heading Accession and Version

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