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    znf1156 zinc finger protein 1156 [ Danio rerio (zebrafish) ]

    Gene ID: 571761, updated on 27-Dec-2024

    Summary

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    Official Symbol
    znf1156provided by ZNC
    Official Full Name
    zinc finger protein 1156provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050208-787
    See related
    Ensembl:ENSDARG00000098800 AllianceGenome:ZFIN:ZDB-GENE-050208-787
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-15h8.11
    Summary
    Predicted to enable metal ion binding activity. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See znf1156 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (1911267..1919599)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (1894400..1902701)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-15h8.17 Neighboring gene zinc finger protein 135 Neighboring gene si:dkey-15h8.13 Neighboring gene zinc finger protein 1167

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 1156

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001104945.1 → NP_001098415.1  zinc finger protein 1156

      See identical proteins and their annotated locations for NP_001098415.1

      Status: PROVISIONAL

      Source sequence(s)
      BC152084
      UniProtKB/TrEMBL
      A0A0N4STV1, A7MC87, A7MCA3
      Related
      ENSDARP00000132593.1, ENSDART00000168205.2
      Conserved Domains (4) summary
      COG5048
      Location:36 → 197
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:11 → 31
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:23 → 48
      zf-H2C2_2; Zinc-finger double domain
      pfam16278
      Location:90 → 115
      zf-C2HE; C2HE / C2H2 / C2HC zinc-binding finger

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      1911267..1919599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009295789.3 → XP_009294064.3  zinc finger protein 1156 isoform X1

      Related
      ENSDARP00000130843.1, ENSDART00000164158.2
    Nucleotide Protein
    Heading Accession and Version

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