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    armc1 armadillo repeat containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 494066, updated on 9-Dec-2024

    Summary

    Official Symbol
    armc1provided by ZNC
    Official Full Name
    armadillo repeat containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041212-33
    See related
    Ensembl:ENSDARG00000013861 AllianceGenome:ZFIN:ZDB-GENE-041212-33
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:103489
    Summary
    Predicted to enable metal ion binding activity. Predicted to be located in mitochondrial outer membrane. Orthologous to human ARMC1 (armadillo repeat containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See armc1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (24702020..24724226, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (24556846..24579052, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family, member e22 Neighboring gene uncharacterized LOC101887106 Neighboring gene mitochondrial fission regulator 1 Neighboring gene phosphodiesterase 7A Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 5 beta

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    armadillo repeat-containing protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008609.1NP_001008609.1  armadillo repeat-containing protein 1

      See identical proteins and their annotated locations for NP_001008609.1

      Status: PROVISIONAL

      Source sequence(s)
      BC086818
      UniProtKB/TrEMBL
      A0A8M1N3L4, Q5PR58
      Related
      ENSDARP00000009420.7, ENSDART00000012399.8

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      24702020..24724226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)