tnfaip8l3 tumor necrosis factor, alpha-induced protein 8-like 3 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tnfaip8l3provided by ZNC
Official Full Name: tumor necrosis factor, alpha-induced protein 8-like 3provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1313
See related: Ensembl:ENSDARG00000088709 AllianceGenome:ZFIN:ZDB-GENE-040426-1313
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:63960
Summary: Predicted to act upstream of or within lipid transport and regulation of apoptotic process. Predicted to be located in plasma membrane. Predicted to be active in cytoplasm. Is expressed in pronephric duct and retinal inner nuclear layer. Orthologous to human TNFAIP8L3 (TNF alpha induced protein 8 like 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	18	NC_007129.7 (39522468..39583601, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	18	NC_007129.6 (39541460..39602593, complement)

Chromosome 18 - NC_007129.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within lipid transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of apoptotic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: tumor necrosis factor alpha-induced protein 8-like protein 3

Names: TNF alpha-induced protein 8-like protein 3; TNFAIP8-like protein 3; tumor necrosis factor, alpha-induced protein 8-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.