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    zgc:153352 zgc:153352 [ Danio rerio (zebrafish) ]

    Gene ID: 767733, updated on 9-Dec-2024

    Summary

    Official Symbol
    zgc:153352provided by ZNC
    Official Full Name
    zgc:153352provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-1142
    See related
    AllianceGenome:ZFIN:ZDB-GENE-060929-1142
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to human C5orf34 (chromosome 5 open reading frame 34). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See zgc:153352 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (8661414..8682375, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (8156776..8177737, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene FYN-binding protein 1-like Neighboring gene FYN-binding protein 1 Neighboring gene poly(A) binding protein interacting protein 1 Neighboring gene MYB binding protein (P160) 1a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC153352

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C5orf34 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076671.1NP_001070139.1  uncharacterized protein C5orf34 homolog

      See identical proteins and their annotated locations for NP_001070139.1

      Status: PROVISIONAL

      Source sequence(s)
      BC124325
      UniProtKB/TrEMBL
      Q08C98
      Conserved Domains (1) summary
      pfam15025
      Location:7151
      DUF4524; Domain of unknown function (DUF4524)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      8661414..8682375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)