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    mon1bb MON1 secretory trafficking family member Bb [ Danio rerio (zebrafish) ]

    Gene ID: 325065, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mon1bbprovided by ZNC
    Official Full Name
    MON1 secretory trafficking family member Bbprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3790
    See related
    Ensembl:ENSDARG00000077434 AllianceGenome:ZFIN:ZDB-GENE-030131-3790
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc54b10; wu:fc54b10
    Summary
    Predicted to be involved in protein targeting to vacuole. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be part of Mon1-Ccz1 complex. Orthologous to human MON1B (MON1 homolog B, secretory trafficking associated). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See mon1bb in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (25693414..25709139)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (25455793..25471523)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor, metabotropic 6b Neighboring gene OTU deubiquitinase 5b Neighboring gene bromodomain and PHD finger containing, 3a Neighboring gene si:dkey-183j2.10 Neighboring gene phospholipase C, eta 2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within protein targeting to vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein targeting to vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Mon1-Ccz1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    vacuolar fusion protein MON1 homolog B; vacuolar fusion protein MON1 homolog B-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      25693414..25709139
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021479843.2 → XP_021335518.1  vacuolar fusion protein MON1 homolog B

      UniProtKB/TrEMBL
      A0A8M1QLJ6, E7EY38
      Related
      ENSDARP00000098438.2, ENSDART00000110224.4
      Conserved Domains (1) summary
      pfam03164
      Location:163 → 571
      Mon1; Trafficking protein Mon1

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394822.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      307265..322990
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001922150.6 → XP_001922185.1  vacuolar fusion protein MON1 homolog B

      UniProtKB/TrEMBL
      A0A8M1QLJ6, E7EY38
      Conserved Domains (1) summary
      pfam03164
      Location:163 → 571
      Mon1; Trafficking protein Mon1
    Nucleotide Protein Strain
    Heading Accession and Version

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