sdhaf3 succinate dehydrogenase complex assembly factor 3 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: sdhaf3provided by ZNC
Official Full Name: succinate dehydrogenase complex assembly factor 3provided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-94
See related: Ensembl:ENSDARG00000036092 AllianceGenome:ZFIN:ZDB-GENE-041010-94
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: acn9; zgc:92826
Summary: Predicted to be involved in mitochondrial respiratory chain complex II assembly and succinate metabolic process. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrial intermembrane space. Orthologous to human SDHAF3 (succinate dehydrogenase complex assembly factor 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (25526354..25548744)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (25942131..25964521)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in mitochondrial respiratory chain complex II assembly	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within mitochondrial respiratory chain complex II assembly	IEA Inferred from Electronic Annotation more info
involved_in mitochondrial respiratory chain complex II assembly	IEA Inferred from Electronic Annotation more info
involved_in succinate metabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in mitochondrial intermembrane space	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrial matrix	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: succinate dehydrogenase assembly factor 3, mitochondrial

Names: SDH assembly factor 3; protein ACN9 homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005926.2 → NP_001005926.2 succinate dehydrogenase assembly factor 3, mitochondrial precursor

Status: VALIDATED

Source sequence(s)

BX842688, CD595521, EH556844

UniProtKB/Swiss-Prot

Q5XIY4

UniProtKB/TrEMBL

A0A8M1N249, A3KQK6

Related

ENSDARP00000052395.4, ENSDART00000052396.5

Conserved Domains (1) summary

pfam13233
Location:10 → 104

Complex1_LYR_2; Complex1_LYR-like