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    klhdc4 kelch domain containing 4 [ Danio rerio (zebrafish) ]

    Gene ID: 569887, updated on 9-Dec-2024

    Summary

    Official Symbol
    klhdc4provided by ZNC
    Official Full Name
    kelch domain containing 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-2057
    See related
    Ensembl:ENSDARG00000100206 AllianceGenome:ZFIN:ZDB-GENE-030131-2057
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb95f04; wu:fb95f04
    Summary
    Orthologous to human KLHDC4 (kelch domain containing 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See klhdc4 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (12707522..12730260, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (12611017..12633755, complement)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene zinc finger, CCHC domain containing 14 Neighboring gene junctophilin 3b Neighboring gene solute carrier family 7 member 5 Neighboring gene carbonic anhydrase Va

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    kelch domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126430.1NP_001119902.1  kelch domain-containing protein 4

      Status: PROVISIONAL

      Source sequence(s)
      AL928934
      UniProtKB/TrEMBL
      A0A0R4IHX2, A0A8M1NGR3
      Related
      ENSDARP00000134354.1, ENSDART00000171834.2
      Conserved Domains (3) summary
      sd00038
      Location:64115
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:131184
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:63117
      Kelch_4; Galactose oxidase, central domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      12707522..12730260 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395190.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      16825..39563 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)