cyb5d1 cytochrome b5 domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cyb5d1provided by ZNC
Official Full Name: cytochrome b5 domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-050417-173
See related: Ensembl:ENSDARG00000056007 AllianceGenome:ZFIN:ZDB-GENE-050417-173
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:112008
Summary: Predicted to enable metal ion binding activity. Involved in regulation of cilium beat frequency. Acts upstream of or within cilium movement. Predicted to be located in cell projection; cytoplasm; and cytoskeleton. Is expressed in several structures, including Kupffer's vesicle; nervous system; presumptive telencephalon; pronephric duct; and pronephric mesoderm. Orthologous to human CYB5D1 (cytochrome b5 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (20771752..20778572, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (20521875..20538335, complement)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in cilium movement	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within cilium movement	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of cilium beat frequency	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
is_active_in cellular_component	ND No biological Data available more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cytochrome b5 domain-containing protein 1

Names: cytochrome b5 domain containing 1 like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.