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    wu:fb16f03 wu:fb16f03 [ Danio rerio (zebrafish) ]

    Gene ID: 100006548, updated on 9-Dec-2024

    Summary

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    Official Symbol
    wu:fb16f03provided by ZNC
    Official Full Name
    wu:fb16f03provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-196
    See related
    Ensembl:ENSDARG00000116712 AllianceGenome:ZFIN:ZDB-GENE-030131-196
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb16f03
    Summary
    Predicted to enable translation initiation factor activity. Predicted to act upstream of or within translational initiation. Is expressed in several structures, including digestive system; immature eye; nervous system; neural rod; and otic vesicle. [provided by Alliance of Genome Resources, Dec 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    all
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    Genomic context

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    See wu:fb16f03 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (44643643..44663067, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (44624154..44643526, complement)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, AMPA 4a Neighboring gene family with sequence similarity 131 member Ab Neighboring gene alkaline phosphatase 3 Neighboring gene platelet derived growth factor d Neighboring gene dynein cytoplasmic 2 heavy chain 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 4 gamma 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      44643643..44663067 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017351287.3 → XP_017206776.1  eukaryotic translation initiation factor 4 gamma 1

      UniProtKB/TrEMBL
      A0A8M6Z1Q3
      Related
      ENSDARP00000152393.1, ENSDART00000192124.1
    Nucleotide Protein Strain
    Heading Accession and Version

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