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    asb16 ankyrin repeat and SOCS box containing 16 [ Danio rerio (zebrafish) ]

    Gene ID: 678621, updated on 9-Dec-2024

    Summary

    Official Symbol
    asb16provided by ZNC
    Official Full Name
    ankyrin repeat and SOCS box containing 16provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-031031-3
    See related
    Ensembl:ENSDARG00000056468 AllianceGenome:ZFIN:ZDB-GENE-031031-3
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:136751
    Summary
    Predicted to enable transmembrane transporter binding activity. Predicted to be involved in axon guidance; protein localization to plasma membrane; and synapse organization. Predicted to act upstream of or within intracellular signal transduction. Predicted to be active in axon initial segment; membrane; and synapse. Orthologous to human ASB16 (ankyrin repeat and SOCS box containing 16). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See asb16 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (19979288..20011807)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (19849952..19862067)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene Rho family GTPase 2 Neighboring gene vesicle amine transport 1 Neighboring gene si:busm1-163l24.4 Neighboring gene si:busm1-163l24.3 Neighboring gene transmembrane and ubiquitin-like domain containing 2 Neighboring gene ataxin 7 like 3a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    ankyrin repeat and SOCS box protein 16

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040368.2NP_001035458.2  ankyrin repeat and SOCS box protein 16

      Status: VALIDATED

      Source sequence(s)
      CR855865
      UniProtKB/TrEMBL
      A0A8M1N8V0, Q1RLW6
      Related
      ENSDARP00000120787.1, ENSDART00000137944.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      19979288..20011807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068217622.1XP_068073723.1  ankyrin repeat and SOCS box protein 16 isoform X1

      UniProtKB/TrEMBL
      A0A8M1N8V0, Q1RLW6

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394527.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      467411..479698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)