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    • Showing Current items.

    si:ch211-51e12.7 si:ch211-51e12.7 [ Danio rerio (zebrafish) ]

    Gene ID: 336335, updated on 12-Sep-2024

    Summary

    Official Symbol
    si:ch211-51e12.7provided by ZNC
    Official Full Name
    si:ch211-51e12.7provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8279
    See related
    Ensembl:ENSDARG00000045914 AllianceGenome:ZFIN:ZDB-GENE-030131-8279
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj64c03; wu:fj64c03; zgc:153016; si:ch211-222h17.2
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See si:ch211-51e12.7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (308657..323471)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (295178..310023)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene si:ch73-252i11.1 Neighboring gene GEN1 Holliday junction 5' flap endonuclease Neighboring gene mesogenin 1 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene TUB like protein 4a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC153016

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC336335

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001044754.2NP_001038219.1  uncharacterized protein LOC336335

      See identical proteins and their annotated locations for NP_001038219.1

      Status: PREDICTED

      Source sequence(s)
      BC142770
      UniProtKB/TrEMBL
      Q5TYZ7
      Related
      ENSDARP00000067488.6, ENSDART00000067489.7

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      308657..323471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_660546.3 RNA Sequence