rundc3ab RUN domain containing 3Ab [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rundc3abprovided by ZNC
Official Full Name: RUN domain containing 3Abprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-842
See related: Ensembl:ENSDARG00000002546 AllianceGenome:ZFIN:ZDB-GENE-040426-842
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: rap2ip; rap2ip1; rundc3a; zgc:55828; zgc:55922
Summary: Predicted to be involved in positive regulation of cGMP-mediated signaling. Is expressed in nervous system. Orthologous to human RUNDC3A (RUN domain containing 3A). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 12

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (9817462..9840819)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (9779592..9802976)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in positive regulation of cGMP-mediated signaling	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: RUN domain-containing protein 3A

Names: Rap2 interacting protein; rap2-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200149.2 → NP_956443.2 RUN domain-containing protein 3A

Status: VALIDATED

Source sequence(s)

CR456629

UniProtKB/Swiss-Prot

A7YDW0, Q7ZT23

UniProtKB/TrEMBL

B2GT93

Related

ENSDARP00000119652.1, ENSDART00000137081.3