gorasp2 golgi reassembly stacking protein 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: gorasp2provided by ZNC
Official Full Name: golgi reassembly stacking protein 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1659
See related: Ensembl:ENSDARG00000015126 AllianceGenome:ZFIN:ZDB-GENE-040426-1659
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:73072
Summary: Predicted to be involved in Golgi organization. Predicted to be active in Golgi apparatus. Orthologous to human GORASP2 (golgi reassembly stacking protein 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (3864040..3875115)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (3703220..3714288)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in Golgi organization	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in Golgi apparatus	IBA Inferred from Biological aspect of Ancestor more info
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Golgi reassembly-stacking protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200703.2 → NP_956997.1 Golgi reassembly-stacking protein 2

See identical proteins and their annotated locations for NP_956997.1

Status: PROVISIONAL

Source sequence(s)

AY398354

UniProtKB/TrEMBL

Q6PC76

Related

ENSDARP00000017335.8, ENSDART00000013743.9

Conserved Domains (2) summary

pfam04495
Location:69 → 205

GRASP55_65; GRASP55/65 PDZ-like domain

cl00117
Location:14 → 100

PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007117.7 Reference GRCz11 Primary Assembly

Range

3864040..3875115

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021476811.2 → XP_021332486.1 Golgi reassembly-stacking protein 2 isoform X1

UniProtKB/TrEMBL

A0A8M9QA83

Conserved Domains (3) summary

pfam04495
Location:69 → 205

GRASP55_65; GRASP55/65 PDZ-like domain

cl00117
Location:14 → 100

PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

cl26464
Location:216 → 420

Atrophin-1; Atrophin-1 family