NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001305185.2 → NP_001292114.1 pleckstrin homology domain-containing family A member 7 isoform 1
See identical proteins and their annotated locations for NP_001292114.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC104918, AC111051, AC160535
- Consensus CDS
-
CCDS85397.1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000138575.2, ENSMUST00000181998.8
- Conserved Domains (4) summary
-
- cd13248
Location:158 → 280
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
- pfam00169
Location:164 → 279
- PH; PH domain
- pfam00397
Location:55 → 84
- WW; WW domain
- pfam07798
Location:709 → 809
- DUF1640; Protein of unknown function (DUF1640)
-
NM_001305186.2 → NP_001292115.1 pleckstrin homology domain-containing family A member 7 isoform 2
See identical proteins and their annotated locations for NP_001292115.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon compared to variant 1. The encoded isoform (2) is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC111051, AC158212, AC160535
- Consensus CDS
-
CCDS85396.1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000138257.2, ENSMUST00000182834.8
- Conserved Domains (4) summary
-
- PHA03247
Location:790 → 896
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:603 → 781
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:799 → 1005
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:112 → 234
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
NM_001305189.2 → NP_001292118.1 pleckstrin homology domain-containing family A member 7 isoform 4
See identical proteins and their annotated locations for NP_001292118.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains multiple differences at the 5' and 3' ends and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (4) has a shorter N-terminus and a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC111051, AC160535
- Consensus CDS
-
CCDS80791.1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000138766.2, ENSMUST00000181981.8
- Conserved Domains (4) summary
-
- PHA03247
Location:731 → 837
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:544 → 722
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:740 → 946
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
NM_001305190.2 → NP_001292119.1 pleckstrin homology domain-containing family A member 7 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) contains multiple differences at the 5' and 3' ends and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (5) has a shorter and distinct N-terminus and a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC111051, AC160535
- Consensus CDS
-
CCDS85395.1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000138544.2, ENSMUST00000182511.8
- Conserved Domains (4) summary
-
- cd00890
Location:591 → 681
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
- cd13248
Location:96 → 218
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
- pfam00169
Location:102 → 217
- PH; PH domain
- pfam07798
Location:647 → 747
- DUF1640; Protein of unknown function (DUF1640)
-
NM_001405069.1 → NP_001391998.1 pleckstrin homology domain-containing family A member 7 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC104918, AC111051, AC160535
- UniProtKB/TrEMBL
-
A0A0U1RPA0
-
NM_001405070.1 → NP_001391999.1 pleckstrin homology domain-containing family A member 7 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC104918, AC111051, AC160535
- UniProtKB/TrEMBL
-
A0A0U1RPA0
-
NM_001405071.1 → NP_001392000.1 pleckstrin homology domain-containing family A member 7 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC111051, AC158212, AC160535
- UniProtKB/TrEMBL
-
A0A0U1RPA0
-
NM_001405072.1 → NP_001392001.1 pleckstrin homology domain-containing family A member 7 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC104918, AC111051, AC160535
- UniProtKB/Swiss-Prot
- B6RSP2, B6RSP3, Q3TUE4, Q3UIL6, Q5XG70, Q8BYE3
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000138214.2, ENSMUST00000182487.8
-
NM_172743.4 → NP_766331.1 pleckstrin homology domain-containing family A member 7 isoform 3
See identical proteins and their annotated locations for NP_766331.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, contains multiple differences in the 5' coding region, and initiates translation at a downstream in-frame start codon compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC111051, AC160535
- Consensus CDS
-
CCDS40099.1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000081714.5, ENSMUST00000084664.11
- Conserved Domains (3) summary
-
- pfam00169
Location:18 → 43
- PH; PH domain
- pfam07798
Location:473 → 573
- DUF1640; Protein of unknown function (DUF1640)
- cl17171
Location:16 → 44
- PH-like; Pleckstrin homology-like domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
115722722..115907617 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017322193.1 → XP_017177682.1 pleckstrin homology domain-containing family A member 7 isoform X12
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:731 → 837
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:544 → 722
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:740 → 946
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322187.1 → XP_017177676.1 pleckstrin homology domain-containing family A member 7 isoform X3
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:798 → 904
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:587 → 789
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:807 → 1013
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322186.2 → XP_017177675.1 pleckstrin homology domain-containing family A member 7 isoform X2
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (5) summary
-
- PHA03247
Location:903 → 1009
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:692 → 894
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:912 → 1118
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:158 → 280
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
- pfam00397
Location:55 → 84
- WW; WW domain
-
XM_030242502.1 → XP_030098362.1 pleckstrin homology domain-containing family A member 7 isoform X6
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (5) summary
-
- PHA03247
Location:863 → 969
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:652 → 854
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:872 → 1078
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:158 → 280
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
- pfam00397
Location:55 → 84
- WW; WW domain
-
XM_036153003.1 → XP_036008896.1 pleckstrin homology domain-containing family A member 7 isoform X1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:798 → 904
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:587 → 789
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:807 → 1013
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_036153002.1 → XP_036008895.1 pleckstrin homology domain-containing family A member 7 isoform X13
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:817 → 923
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:606 → 808
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:826 → 1032
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:112 → 234
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322190.2 → XP_017177679.1 pleckstrin homology domain-containing family A member 7 isoform X7
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:857 → 963
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:646 → 848
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:866 → 1072
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:112 → 234
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322195.3 → XP_017177684.1 pleckstrin homology domain-containing family A member 7 isoform X1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:798 → 904
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:587 → 789
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:807 → 1013
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322194.3 → XP_017177683.1 pleckstrin homology domain-containing family A member 7 isoform X1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:798 → 904
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:587 → 789
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:807 → 1013
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322189.1 → XP_017177678.1 pleckstrin homology domain-containing family A member 7 isoform X5
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:758 → 864
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:547 → 749
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:767 → 973
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322188.1 → XP_017177677.1 pleckstrin homology domain-containing family A member 7 isoform X4
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:771 → 877
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:583 → 762
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:780 → 986
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322185.1 → XP_017177674.1 pleckstrin homology domain-containing family A member 7 isoform X1
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:798 → 904
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:587 → 789
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:807 → 1013
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322192.1 → XP_017177681.1 pleckstrin homology domain-containing family A member 7 isoform X9
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:841 → 947
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:630 → 832
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:850 → 1056
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:96 → 218
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322198.3 → XP_017177687.1 pleckstrin homology domain-containing family A member 7 isoform X16
- Conserved Domains (3) summary
-
- PHA03247
Location:210 → 316
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:76 → 201
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:219 → 425
- PRK10263; DNA translocase FtsK; Provisional
-
XM_030242504.1 → XP_030098364.1 pleckstrin homology domain-containing family A member 7 isoform X14
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Conserved Domains (4) summary
-
- PHA03247
Location:790 → 896
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:603 → 781
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:799 → 1005
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:112 → 234
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
-
XM_017322191.1 → XP_017177680.1 pleckstrin homology domain-containing family A member 7 isoform X8
- UniProtKB/TrEMBL
-
A0A0U1RPA0
- Related
- ENSMUSP00000145894.2, ENSMUST00000182443.8
- Conserved Domains (4) summary
-
- PHA03247
Location:731 → 837
- PHA03247; large tegument protein UL36; Provisional
- COG1196
Location:544 → 722
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- PRK10263
Location:740 → 946
- PRK10263; DNA translocase FtsK; Provisional
- cd13248
Location:53 → 175
- PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
RNA
-
XR_004934083.1 RNA Sequence
-
XR_001785538.2 RNA Sequence
-
XR_004934088.1 RNA Sequence
-
XR_004934086.1 RNA Sequence
-
XR_004934084.1 RNA Sequence
-
XR_004934085.1 RNA Sequence
-
XR_004934087.1 RNA Sequence
-
XR_001785539.1 RNA Sequence
- Related
-
ENSMUST00000216517.2