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    Mafa MAF bZIP transcription factor A [ Mus musculus (house mouse) ]

    Gene ID: 378435, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mafaprovided by MGI
    Official Full Name
    MAF bZIP transcription factor Aprovided by MGI
    Primary source
    MGI:MGI:2673307
    See related
    Ensembl:ENSMUSG00000047591 AllianceGenome:MGI:2673307
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    RIPE3b1
    Summary
    Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Acts upstream of or within positive regulation of DNA-templated transcription. Located in nucleus. Is expressed in several structures, including lens vesicle; myotome; nervous system; pancreas; and spleen. Used to study maturity-onset diabetes of the young and type 2 diabetes mellitus. Orthologous to human MAFA (MAF bZIP transcription factor A). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See Mafa in Genome Data Viewer
    Location:
    15 D3; 15 34.82 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (75617350..75620170, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (75745501..75748321, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 1, mitochondrial Neighboring gene STARR-positive B cell enhancer ABC_E4136 Neighboring gene rhophilin, Rho GTPase binding protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E10864 Neighboring gene zinc finger CCCH type containing 3 Neighboring gene predicted gene, 23747 Neighboring gene STARR-positive B cell enhancer ABC_E1911 Neighboring gene STARR-seq mESC enhancer starr_39021 Neighboring gene predicted gene, 34851

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    transcription factor MafA
    Names
    Mafa homolog
    V-maf musculoaponeurotic fibrosarcoma oncogene homolog A
    pancreatic beta-cell-specific transcriptional activator
    v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_194350.2NP_919331.1  transcription factor MafA

      See identical proteins and their annotated locations for NP_919331.1

      Status: VALIDATED

      Source sequence(s)
      AC116393
      Consensus CDS
      CCDS27549.1
      UniProtKB/Swiss-Prot
      Q8CF90
      Related
      ENSMUSP00000054226.5, ENSMUST00000062002.6
      Conserved Domains (2) summary
      cd14718
      Location:255323
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
      pfam08383
      Location:111142
      Maf_N; Maf N-terminal region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      75617350..75620170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)