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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001252525.1 → NP_001239454.1 cytoplasmic polyadenylation element-binding protein 1 isoform 1
See identical proteins and their annotated locations for NP_001239454.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AK077799, BC125476, BY720025, CO803180
- Consensus CDS
-
CCDS57557.1
- UniProtKB/TrEMBL
- F6X7Z3, Q059Z2
- Related
- ENSMUSP00000137079.2, ENSMUST00000178892.3
- Conserved Domains (4) summary
-
- cd12723
Location:309 → 416
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:427 → 512
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:504 → 559
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 307
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
NM_001252526.1 → NP_001239455.1 cytoplasmic polyadenylation element-binding protein 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses a different splice in the coding region, compared to variant 1. The resulting protein (isoform 3) is shorter when it is compared to isoform 1.
- Source sequence(s)
-
AK077799, BC125476, BC144948, BY720025, CO803180
- UniProtKB/TrEMBL
-
F6X7Z3
- Related
- ENSMUSP00000120139.2, ENSMUST00000130310.8
- Conserved Domains (4) summary
-
- cd12723
Location:308 → 410
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:421 → 506
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:498 → 553
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 306
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
NM_001357107.1 → NP_001344036.1 cytoplasmic polyadenylation element-binding protein 1 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream start codon and result in an isoform (4) with a shorter N-terminus, compared to isoform 1. Variants 4 and 12-16 all encode the same isoform (4).
- Source sequence(s)
-
AC162897, CO803180
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- pfam16366
Location:423 → 478
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 231
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
- cd12723
Location:233 → 335
- RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:346 → 429
- RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
-
NM_001412273.1 → NP_001399202.1 cytoplasmic polyadenylation element-binding protein 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412274.1 → NP_001399203.1 cytoplasmic polyadenylation element-binding protein 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412275.1 → NP_001399204.1 cytoplasmic polyadenylation element-binding protein 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412276.1 → NP_001399205.1 cytoplasmic polyadenylation element-binding protein 1 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412277.1 → NP_001399206.1 cytoplasmic polyadenylation element-binding protein 1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412278.1 → NP_001399207.1 cytoplasmic polyadenylation element-binding protein 1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412279.1 → NP_001399208.1 cytoplasmic polyadenylation element-binding protein 1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC162897
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412280.1 → NP_001399209.1 cytoplasmic polyadenylation element-binding protein 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412281.1 → NP_001399210.1 cytoplasmic polyadenylation element-binding protein 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412282.1 → NP_001399211.1 cytoplasmic polyadenylation element-binding protein 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC162897
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412283.1 → NP_001399212.1 cytoplasmic polyadenylation element-binding protein 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412284.1 → NP_001399213.1 cytoplasmic polyadenylation element-binding protein 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC162897
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412285.1 → NP_001399214.1 cytoplasmic polyadenylation element-binding protein 1 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412286.1 → NP_001399215.1 cytoplasmic polyadenylation element-binding protein 1 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC162897, AC167120, AC169082
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_001412287.1 → NP_001399216.1 cytoplasmic polyadenylation element-binding protein 1 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC162897
- UniProtKB/TrEMBL
-
F6X7Z3
-
NM_007755.5 → NP_031781.1 cytoplasmic polyadenylation element-binding protein 1 isoform 2
See identical proteins and their annotated locations for NP_031781.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses a different splice in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter when it is compared to isoform 1.
- Source sequence(s)
-
AK077799, BC144948, BY720025, CO803180, Y08260
- Consensus CDS
-
CCDS40007.1
- UniProtKB/Swiss-Prot
- P70166, Q8C5P9
- UniProtKB/TrEMBL
-
F6X7Z3
- Related
- ENSMUSP00000095936.4, ENSMUST00000098331.10
- Conserved Domains (4) summary
-
- cd12723
Location:308 → 415
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:426 → 511
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:503 → 558
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 306
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
80996774..81105207 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030242061.2 → XP_030097921.1 cytoplasmic polyadenylation element-binding protein 1 isoform X7
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- cd12723
Location:309 → 399
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:410 → 495
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:487 → 513
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 307
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
XM_011250788.4 → XP_011249090.1 cytoplasmic polyadenylation element-binding protein 1 isoform X5
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- cd12723
Location:347 → 437
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:448 → 533
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:525 → 580
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:48 → 345
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
XM_036152627.1 → XP_036008520.1 cytoplasmic polyadenylation element-binding protein 1 isoform X6
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- pfam16366
Location:524 → 579
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:44 → 344
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
- cd12723
Location:346 → 436
- RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:447 → 530
- RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
-
XM_011250785.4 → XP_011249087.1 cytoplasmic polyadenylation element-binding protein 1 isoform X2
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- cd12723
Location:346 → 453
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:464 → 549
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:541 → 596
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:48 → 344
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
XM_011250784.4 → XP_011249086.1 cytoplasmic polyadenylation element-binding protein 1 isoform X1
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- cd12723
Location:347 → 454
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:465 → 550
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:542 → 597
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:48 → 345
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
XM_011250790.4 → XP_011249092.1 cytoplasmic polyadenylation element-binding protein 1 isoform X8
See identical proteins and their annotated locations for XP_011249092.1
- UniProtKB/TrEMBL
-
F6X7Z3
- Conserved Domains (4) summary
-
- cd12723
Location:233 → 340
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:351 → 436
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:428 → 483
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 231
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
-
XM_011250792.3 → XP_011249094.1 cytoplasmic polyadenylation element-binding protein 1 isoform X10
- Conserved Domains (4) summary
-
- cd12723
Location:179 → 286
- RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- cd12725
Location:297 → 382
- RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
- pfam16366
Location:374 → 429
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- pfam16368
Location:1 → 177
- CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus