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    C130093G08Rik RIKEN cDNA C130093G08 gene [ Mus musculus (house mouse) ]

    Gene ID: 320032, updated on 17-Aug-2024

    Summary

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    Official Symbol
    C130093G08Rikprovided by MGI
    Official Full Name
    RIKEN cDNA C130093G08 geneprovided by MGI
    Primary source
    MGI:MGI:2443208
    See related
    Ensembl:ENSMUSG00000106775 AllianceGenome:MGI:2443208
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See C130093G08Rik in Genome Data Viewer
    Location:
    6; 6 A3.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (23251160..23253326)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene SET translocation pseudogene Neighboring gene STARR-seq mESC enhancer starr_15332 Neighboring gene Fez family zinc finger 1 Neighboring gene Ca2+-dependent activator protein for secretion 2 Neighboring gene STARR-seq mESC enhancer starr_15334 Neighboring gene STARR-seq mESC enhancer starr_15336 Neighboring gene STARR-seq mESC enhancer starr_15337 Neighboring gene predicted gene, 38775 Neighboring gene ring finger protein 133

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000072.7 Chromosome 6 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The neonatal ventromedial hypothalamus transcriptome reveals novel markers with spatially distinct patterning. Kurrasch DM, et al. J Neurosci, 2007 Dec 12. PMID 18077674, Free PMC Article
    2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187947.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC153639
      Related
      ENSMUST00000202489.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      23251160..23253326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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