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    H3c13 H3 clustered histone 13 [ Mus musculus (house mouse) ]

    Gene ID: 319154, updated on 9-Dec-2024

    Summary

    Official Symbol
    H3c13provided by MGI
    Official Full Name
    H3 clustered histone 13provided by MGI
    Primary source
    MGI:MGI:2448351
    See related
    Ensembl:ENSMUSG00000074403 AllianceGenome:MGI:2448351
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H3c2; H3c3; H3c4; H3c6; H3c7; H3c14; H3c15; H3-615; H3-616; Hist2h3b
    Summary
    Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. This structure consists of approximately 146 bp of DNA wrapped around a nucleosome, an octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H3 family. [provided by RefSeq, Aug 2015]
    Orthologs
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    Genomic context

    See H3c13 in Genome Data Viewer
    Location:
    3 F2.1; 3 41.71 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96175970..96176471)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96268654..96269155)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08411 Neighboring gene predicted gene 20627 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:96067604-96067791 Neighboring gene H4 clustered histone 14 Neighboring gene H2B clustered histone 18 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:96077638-96077791 Neighboring gene STARR-positive B cell enhancer ABC_E6080 Neighboring gene Fc receptor, IgG, high affinity I

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    histone H3.2
    Names
    H3-clustered histone 14
    H3-clustered histone 15
    H3-clustered histone 2
    H3-clustered histone 3
    H3-clustered histone 4
    H3-clustered histone 6
    H3-clustered histone 7
    histone cluster 2, H3b
    histone protein Hist2h2bb

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178215.2NP_835587.1  histone H3.2

      See identical proteins and their annotated locations for NP_835587.1

      Status: REVIEWED

      Source sequence(s)
      AC125099
      Consensus CDS
      CCDS17638.1
      UniProtKB/Swiss-Prot
      A3KMN6, P84228, Q60582, Q78E59, Q8CGN9
      UniProtKB/TrEMBL
      A1L0V4, B9EI85
      Related
      ENSMUSP00000096442.3, ENSMUST00000098843.3
      Conserved Domains (1) summary
      PTZ00018
      Location:1136
      PTZ00018; histone H3; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      96175970..96176471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)