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    Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816996, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ankyrin repeat family protein
    Primary source
    TAIR:AT2G24600
    Locus tag
    AT2G24600
    See related
    Araport:AT2G24600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25P17.10; F25P17_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (10452034..10454593, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RNA recognition motif and CCHC-type zinc finger domains containing protein Neighboring gene ncRNA Neighboring gene cyclic nucleotide-gated channel 14 Neighboring gene Defensin-like (DEFL) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128021.3
    NM_179724.4
    NM_201799.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ankyrin repeat family protein
    NP_001189592.1
    • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G10340.1).
    NP_565575.1
    • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G10340.1); Has 23294 Blast hits to 11989 proteins in 581 species: Archae - 40; Bacteria - 1638; Metazoa - 13006; Fungi - 1656; Plants - 2370; Viruses - 127; Other Eukaryotes - 4457 (source: NCBI BLink).
    NP_850055.2
    • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G10340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973528.1
    • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G10340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10452034..10454593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202663.2 → NP_001189592.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189592.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Q9, F4IPR3
      Conserved Domains (6) summary
      COG0531
      Location:406 → 545
      PotE; Amino acid transporter [Amino acid transport and metabolism]
      cd00204
      Location:66 → 222
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:41 → 133
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:171 → 222
      Ank_4; Ankyrin repeats (many copies)
      pfam13962
      Location:399 → 506
      PGG; Domain of unknown function
      sd00045
      Location:38 → 68
      ANK; ANK repeat [structural motif]

    2. NM_179724.4 → NP_850055.2  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850055.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Q9, Q93ZX5, Q9SJA5
      Conserved Domains (5) summary
      cd00204
      Location:66 → 222
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:41 → 133
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:171 → 222
      Ank_4; Ankyrin repeats (many copies)
      pfam13962
      Location:399 → 486
      PGG; Domain of unknown function
      sd00045
      Location:38 → 68
      ANK; ANK repeat [structural motif]

    3. NM_201799.3 → NP_973528.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973528.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Q9, F4IPR3
      Conserved Domains (6) summary
      COG0531
      Location:406 → 545
      PotE; Amino acid transporter [Amino acid transport and metabolism]
      cd00204
      Location:66 → 222
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:41 → 133
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:171 → 222
      Ank_4; Ankyrin repeats (many copies)
      pfam13962
      Location:399 → 506
      PGG; Domain of unknown function
      sd00045
      Location:38 → 68
      ANK; ANK repeat [structural motif]

    4. NM_128021.3 → NP_565575.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565575.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Q9, Q93ZX5, Q9SJA5
      Conserved Domains (5) summary
      cd00204
      Location:66 → 222
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:41 → 133
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:171 → 222
      Ank_4; Ankyrin repeats (many copies)
      pfam13962
      Location:399 → 486
      PGG; Domain of unknown function
      sd00045
      Location:38 → 68
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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