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    RER1B endoplasmatic reticulum retrieval protein 1B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816698, updated on 18-Sep-2024

    Summary

    Official Symbol
    RER1B
    Official Full Name
    endoplasmatic reticulum retrieval protein 1B
    Primary source
    TAIR:AT2G21600
    Locus tag
    AT2G21600
    See related
    Araport:AT2G21600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRER1B; endoplasmatic reticulum retrieval protein 1B; F2G1.13; F2G1_13
    Summary
    Key player of retrieval of ER membrane proteins
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    Genomic context

    See RER1B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (9242782..9244945)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S25 family protein Neighboring gene Glucose-1-phosphate adenylyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene pectinesterase 11 Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene Sec23/Sec24 protein transport family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_127731.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in Golgi apparatus PubMed 
    located_in cis-Golgi network PubMed 
    located_in endoplasmic reticulum PubMed 
    located_in plasma membrane  

    General protein information

    Preferred Names
    endoplasmatic reticulum retrieval protein 1B
    NP_179754.1
    • endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9242782..9244945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127731.3 → NP_179754.1  endoplasmatic reticulum retrieval protein 1B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179754.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48671, Q541D3, Q9SIK0
      UniProtKB/TrEMBL
      A0A178VYZ6, A0A5S9X0C0
      Conserved Domains (1) summary
      pfam03248
      Location:19 → 180
      Rer1; Rer1 family
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