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    Early-responsive to dehydration stress protein (ERD4) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843277, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Early-responsive to dehydration stress protein (ERD4)
    Primary source
    TAIR:AT1G69450
    Locus tag
    AT1G69450
    See related
    Araport:AT1G69450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10D13.27; F10D13_27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (26106790..26110357, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Son of sevenless protein Neighboring gene Argonaute family protein Neighboring gene ncRNA Neighboring gene emp24/gp25L/p24 family/GOLD family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001198427.2
    NM_001334409.1
    NM_105612.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Early-responsive to dehydration stress protein (ERD4)
    NP_001185356.1
    • Early-responsive to dehydration stress protein (ERD4); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1).
    NP_177104.2
    • Early-responsive to dehydration stress protein (ERD4); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 1403 Blast hits to 1256 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 667; Plants - 417; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26106790..26110357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198427.2 → NP_001185356.1  Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185356.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I248, Q9C792
      UniProtKB/TrEMBL
      A0A097NUQ3, A0A178WCV8, A0A384KS87, A0A7G2E590
      Conserved Domains (2) summary
      COG5594
      Location:2 → 649
      COG5594; Uncharacterized integral membrane protein [Function unknown]
      pfam02714
      Location:350 → 614
      RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate

    2. NM_001334409.1 → NP_001320819.1  Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AP05, A0A7G2E590

    3. NM_105612.2 → NP_177104.2  Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177104.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I248, Q9C792
      UniProtKB/TrEMBL
      A0A097NUQ3, A0A178WCV8, A0A384KS87, A0A7G2E590
      Conserved Domains (2) summary
      COG5594
      Location:2 → 649
      COG5594; Uncharacterized integral membrane protein [Function unknown]
      pfam02714
      Location:350 → 614
      RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I248.1

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