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    Thioredoxin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826591, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Thioredoxin family protein
    Primary source
    TAIR:AT4G10000
    Locus tag
    AT4G10000
    See related
    Araport:AT4G10000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5L19.130; T5L19_130
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    11
    Sequence:
    Chromosome: 4; NC_003075.7 (6260302..6263181, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene glucuronoxylan 4-O-methyltransferase-like protein (DUF579) Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene hydroxysteroid dehydrogenase 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117068.5
    NM_179022.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Thioredoxin family protein
    NP_567349.1
    • Thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione S-transferase, N-terminal (InterPro:IPR004045); BEST Arabidopsis thaliana protein match is: Thioredoxin family protein (TAIR:AT5G03880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_849353.1
    • Thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione S-transferase, N-terminal (InterPro:IPR004045); BEST Arabidopsis thaliana protein match is: Thioredoxin family protein (TAIR:AT5G03880.1); Has 671 Blast hits to 553 proteins in 201 species: Archae - 78; Bacteria - 341; Metazoa - 0; Fungi - 7; Plants - 162; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6260302..6263181 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179022.4 → NP_849353.1  Thioredoxin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849353.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DFX0, F4JKW0
      Conserved Domains (2) summary
      COG0625
      Location:131 → 211
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      cd03041
      Location:130 → 207
      GST_N_2GST_N; GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a ...

    2. NM_117068.5 → NP_567349.1  Thioredoxin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567349.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DFX0, F4JKW0
      Conserved Domains (2) summary
      COG0625
      Location:131 → 211
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      cd03041
      Location:130 → 207
      GST_N_2GST_N; GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a ...
    Nucleotide Protein
    Heading Accession and Version

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