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    ELMO/CED-12 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825197, updated on 18-Sep-2024

    Summary

    Official Full Name
    ELMO/CED-12 family protein
    Primary source
    TAIR:AT3G60260
    Locus tag
    AT3G60260
    See related
    Araport:AT3G60260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (22273799..22277292)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Zinc-binding ribosomal protein family protein Neighboring gene casein kinase II beta chain 3 Neighboring gene Cupredoxin superfamily protein Neighboring gene uclacyanin 3

    General gene information

    NM_001035823.2
    NM_001084851.2
    NM_115890.4
    NM_180396.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    ELMO/CED-12 family protein
    NP_001030900.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001078320.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
    NP_567097.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
    NP_850727.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22273799..22277292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115890.4NP_567097.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567097.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEI9, A0A384LM43, Q8VZ78, Q9LY38
      Conserved Domains (1) summary
      pfam04727
      Location:70236
      ELMO_CED12; ELMO/CED-12 family
    2. NM_001084851.2NP_001078320.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078320.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEI9, A0A384LM43, Q8VZ78, Q9LY38
      Conserved Domains (1) summary
      pfam04727
      Location:70236
      ELMO_CED12; ELMO/CED-12 family
    3. NM_180396.2NP_850727.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850727.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEI9, A0A384LM43, Q8VZ78, Q9LY38
      Conserved Domains (1) summary
      pfam04727
      Location:70236
      ELMO_CED12; ELMO/CED-12 family
    4. NM_001035823.2NP_001030900.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030900.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EYV2, B9DGY8, F4JAP3
      Conserved Domains (1) summary
      pfam04727
      Location:48214
      ELMO_CED12; ELMO/CED-12 family