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    CPUORF47 peptide upstream protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831909, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CPUORF47
    Official Full Name
    peptide upstream protein
    Primary source
    TAIR:AT5G03190
    Locus tag
    AT5G03190
    See related
    Araport:AT5G03190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    conserved peptide upstream open reading frame 47; F15A17.220; F15A17_220
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    Genomic context

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    See CPUORF47 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (758374..760382)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DnaJ P58IPK-like protein Neighboring gene FASCICLIN-like arabinogalactan-protein 11 Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene uncharacterized protein Neighboring gene E3 ubiquitin-protein ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plants utilise ancient conserved peptide upstream open reading frames in stress-responsive translational regulation. Causier B, et al. Plant Cell Environ, 2022 Apr. PMID 35128674, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Miscellaneous features

    • Loc: 758539-758676 AT5G03190.uORF1
    NM_001085053.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    peptide upstream protein
    NP_001078522.1
    • conserved peptide upstream open reading frame 47 (CPUORF47); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 277 Blast hits to 276 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 267; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
    NP_195939.1
    • conserved peptide upstream open reading frame 47 (CPUORF47); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 272 Blast hits to 272 proteins in 24 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      758374..760382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120397.4 → NP_195939.1  peptide upstream protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195939.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQ01, A0A5S9Y1G1, Q9LYW6
      Conserved Domains (1) summary
      cl17173
      Location:155 → 187
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. NM_001085053.2 → NP_001078522.1  peptide upstream protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078522.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQ01, A0A7G2F6V2, A8MQH8
      Conserved Domains (1) summary
      cl17173
      Location:179 → 211
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version

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