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    Ubiquitin system component Cue protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833203, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ubiquitin system component Cue protein
    Primary source
    TAIR:AT5G32440
    Locus tag
    AT5G32440
    See related
    Araport:AT5G32440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18O9.50; F18O9_50
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (12076717..12078603)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene RNA binding (RRM/RBD/RNP motifs) family protein Neighboring gene Transcriptional factor B3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001125832.1
    NM_001203489.1
    NM_122823.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ubiquitin system component Cue protein
    NP_001119304.1
    • Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001190418.1
    • Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1).
    NP_568521.1
    • Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      12076717..12078603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122823.4 → NP_568521.1  Ubiquitin system component Cue protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568521.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UDD9, A0A5S9Y973, Q8H1Q3, Q94K99
      Conserved Domains (1) summary
      cd14279
      Location:48 → 82
      CUE; CUE domain found in ubiquitin-binding CUE proteins

    2. NM_001203489.1 → NP_001190418.1  Ubiquitin system component Cue protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190418.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y973, F4KED5, Q94K99
      Conserved Domains (1) summary
      cd14279
      Location:48 → 82
      CUE; CUE domain found in ubiquitin-binding CUE proteins

    3. NM_001125832.1 → NP_001119304.1  Ubiquitin system component Cue protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119304.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H6U1
      Conserved Domains (1) summary
      cd14279
      Location:48 → 82
      CUE; CUE domain found in ubiquitin-binding CUE proteins
    Nucleotide Protein
    Heading Accession and Version

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