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    scpl30 serine carboxypeptidase-like 30 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827176, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl30
    Official Full Name
    serine carboxypeptidase-like 30
    Primary source
    TAIR:AT4G15100
    Locus tag
    AT4G15100
    See related
    Araport:AT4G15100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3595W; FCAALL.186; serine carboxypeptidase-like 30
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    Genomic context

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    See scpl30 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (8625830..8629620)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene catalytic LigB subunit of aromatic ring-opening dioxygenase family Neighboring gene uncharacterized protein Neighboring gene cytochrome P450, family 97, subfamily B, polypeptide 3 Neighboring gene VQ motif-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 30
    NP_193246.2
    • serine carboxypeptidase-like 30 (scpl30); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 31 (TAIR:AT1G11080.2); Has 3290 Blast hits to 3237 proteins in 263 species: Archae - 0; Bacteria - 12; Metazoa - 622; Fungi - 829; Plants - 1512; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8625830..8629620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117599.3 → NP_193246.2  serine carboxypeptidase-like 30 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193246.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23364
      UniProtKB/TrEMBL
      A0A7G2F0V5
      Conserved Domains (1) summary
      pfam00450
      Location:49 → 477
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O23364.2

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