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    psbH photosystem II protein H [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844730, updated on 18-Sep-2024

    Summary

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    Gene symbol
    psbH
    Gene description
    photosystem II protein H
    Locus tag
    ArthCp052
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See psbH in Genome Data Viewer
    Sequence:
    NC_000932.1 (74485..74706)

    NC_000932.1Genomic Context describing neighboring genes Neighboring gene photosystem II protein T Neighboring gene photosystem II protein N Neighboring gene cytochrome b6 Neighboring gene cytochrome b6/f complex subunit IV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000932.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the psbH precursor RNAs reveals a precise endoribonuclease cleavage site in the psbT/psbH intergenic region that is dependent on psbN gene expression. Chevalier F, et al. Plant Mol Biol, 2015 Jul. PMID 26012647
    2. RNA binding and RNA remodeling activities of the half-a-tetratricopeptide (HAT) protein HCF107 underlie its effects on gene expression. Hammani K, et al. Proc Natl Acad Sci U S A, 2012 Apr 10. PMID 22451905, Free PMC Article
    3. The nuclear gene HCF107 encodes a membrane-associated R-TPR (RNA tetratricopeptide repeat)-containing protein involved in expression of the plastidial psbH gene in Arabidopsis. Sane AP, et al. Plant J, 2005 Jun. PMID 15918885
    4. Complete structure of the chloroplast genome of Arabidopsis thaliana. Sato S, et al. DNA Res, 1999 Oct 29. PMID 10574454
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. psbH RNA, that is absent in plants where the psbN gene is not transcribed, is also strongly diminished in all csp41 endonuclease mutant plants
      Title: Characterization of the psbH precursor RNAs reveals a precise endoribonuclease cleavage site in the psbT/psbH intergenic region that is dependent on psbN gene expression.
    2. The identification of the HCF107 gene that is involved in the 5'-end processing/stability and/or translation of the psbH gene and in the translation of the psbB gene is reported.
      Title: The nuclear gene HCF107 encodes a membrane-associated R-TPR (RNA tetratricopeptide repeat)-containing protein involved in expression of the plastidial psbH gene in Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    photosystem II protein H
    NP_051087.1
    • photosystem II phosphoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000932.1 Reference assembly

      Range
      74485..74706
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_051087.1 photosystem II protein H (chloroplast) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_051087.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P56780
      UniProtKB/TrEMBL
      A0A1B1W4X2
      Conserved Domains (1) summary
      CHL00066
      Location:1 → 73
      psbH; photosystem II protein H
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P56780.2

    Gene LinkOut

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