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    sams-4 putative S-adenosylmethionine synthase 4 [ Caenorhabditis elegans ]

    Gene ID: 177354, updated on 9-Dec-2024

    Summary

    Official Symbol
    sams-4
    Official Full Name
    putative S-adenosylmethionine synthase 4
    Primary source
    WormBase:WBGene00015540
    Locus tag
    CELE_C06E7.3
    See related
    AllianceGenome:WB:WBGene00015540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable methionine adenosyltransferase activity. Predicted to be involved in S-adenosylmethionine biosynthetic process. Predicted to be active in cytosol. Is expressed in pharyngeal gland cell. Human ortholog(s) of this gene implicated in hypermethioninemia and lung cancer. Orthologous to human MAT1A (methionine adenosyltransferase 1A) and MAT2A (methionine adenosyltransferase 2A). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See sams-4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (5844061..5846369, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative S-adenosylmethionine synthase 3 Neighboring gene SH2 domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables methionine adenosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methionine adenosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in S-adenosylmethionine biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in S-adenosylmethionine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in one-carbon metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    putative S-adenosylmethionine synthase 4
    NP_500871.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      5844061..5846369 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068470.6NP_500871.1  putative S-adenosylmethionine synthase 4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500871.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P50306
      Conserved Domains (4) summary
      PTZ00104
      Location:1386
      PTZ00104; S-adenosylmethionine synthase; Provisional
      pfam00438
      Location:5102
      S-AdoMet_synt_N; S-adenosylmethionine synthetase, N-terminal domain
      pfam02772
      Location:117238
      S-AdoMet_synt_M; S-adenosylmethionine synthetase, central domain
      pfam02773
      Location:240376
      S-AdoMet_synt_C; S-adenosylmethionine synthetase, C-terminal domain

    RNA

    1. NR_131525.1 RNA Sequence

      Status: REVIEWED