utp-11 putative U3 small nucleolar RNA-associated protein 11 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: utp-11
Official Full Name: putative U3 small nucleolar RNA-associated protein 11
Primary source: WormBase:WBGene00007623
Locus tag: CELE_C16C10.2
See related: AllianceGenome:WB:WBGene00007623
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in translation. Predicted to be located in nucleus. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Orthologous to human UTP11 (UTP11 small subunit processome component). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See utp-11 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 4

Sequence:: Chromosome: III; NC_003281.10 (4177545..4178664, complement)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

C16C10.2 (e-PCR)
- UniSTS:307256

C16C10.1 (e-PCR)
- UniSTS:313683

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in rRNA processing	IEA Inferred from Electronic Annotation more info
involved_in translation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleolus	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of small-subunit processome	IBA Inferred from Biological aspect of Ancestor more info
part_of small-subunit processome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative U3 small nucleolar RNA-associated protein 11

NP_497835.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

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Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

4177545..4178664 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_065434.7 → NP_497835.1 putative U3 small nucleolar RNA-associated protein 11 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_497835.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q09462

Conserved Domains (1) summary

pfam03998
Location:14 → 262

Utp11; Utp11 protein