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    Y39B6A.1 Histidine-rich glycoprotein-like [ Caenorhabditis elegans ]

    Gene ID: 180264, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y39B6A.1
    Official Full Name
    Histidine-rich glycoprotein-like
    Primary source
    WormBase:WBGene00012664
    Locus tag
    CELE_Y39B6A.1
    See related
    AllianceGenome:WB:WBGene00012664
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in nucleolus and nucleoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y39B6A.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (19201016..19203607, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Iron-sulfur cluster assembly 1 homolog, mitochondrial Neighboring gene Serine/threonine specific protein phosphatases domain-containing protein;Serine/threonine-protein phosphatase 5 Neighboring gene ncRNA Neighboring gene Nuclear hormone receptor family member nhr-79;Nuclear receptor domain-containing protein Neighboring gene Gustatory receptor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. F-actin asymmetry and the endoplasmic reticulum-associated TCC-1 protein contribute to stereotypic spindle movements in the Caenorhabditis elegans embryo. Berends CW, et al. Mol Biol Cell, 2013 Jul. PMID 23699393, Free PMC Article
    2. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article
    3. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Histidine-rich glycoprotein-like
    NP_741698.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19201016..19203607 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171608.6 → NP_741698.1  Histidine-rich glycoprotein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741698.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NES7
    Nucleotide Protein
    Heading Accession and Version

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