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    fbxa-170 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183273, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxa-170
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00016486
    Locus tag
    CELE_C36C9.3
    See related
    AllianceGenome:WB:WBGene00016486
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxa-170 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Sequence:
    Chromosome: X; NC_003284.9 (1676205..1678121, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Putative T-box protein 31 Neighboring gene ncRNA Neighboring gene J domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_508309.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      1676205..1678121 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075908.4 → NP_508309.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508309.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZK9
      Conserved Domains (3) summary
      pfam00646
      Location:76 → 118
      F-box; F-box domain
      pfam01827
      Location:214 → 360
      FTH; FTH domain
      pfam17906
      Location:12 → 56
      HTH_48; HTH domain in Mos1 transposase
    Nucleotide Protein
    Heading Accession and Version

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