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    K08E4.2 Glycolipid transfer protein domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178144, updated on 9-Dec-2024

    Summary

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    Official Symbol
    K08E4.2
    Official Full Name
    Glycolipid transfer protein domain-containing protein
    Primary source
    WormBase:WBGene00010666
    Locus tag
    CELE_K08E4.2
    See related
    AllianceGenome:WB:WBGene00010666
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ceramide 1-phosphate binding activity and ceramide 1-phosphate transfer activity. Predicted to be involved in ceramide transport and intermembrane lipid transfer. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human CPTP (ceramide-1-phosphate transfer protein) and GLTPD2 (glycolipid transfer protein domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See K08E4.2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (12055674..12056656, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Strictosidine synthase conserved region domain-containing protein Neighboring gene Beta-1,3-galactosyltransferase bre-5;Hexosyltransferase Neighboring gene Transcription elongation factor SPT5 Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ceramide 1-phosphate binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ceramide 1-phosphate transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables lipid transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in ceramide 1-phosphate transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in ceramide transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intermembrane lipid transfer IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intermembrane lipid transfer IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Glycolipid transfer protein domain-containing protein
    NP_001255614.1
    • Confirmed by transcript evidence
    NP_001255615.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12055674..12056656 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268685.4 → NP_001255614.1  Glycolipid transfer protein domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255614.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21333
      Conserved Domains (1) summary
      pfam08718
      Location:30 → 170
      GLTP; Glycolipid transfer protein (GLTP)

    2. NM_001268686.3 → NP_001255615.1  Glycolipid transfer protein domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255615.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GUA0
      Conserved Domains (1) summary
      pfam08718
      Location:3 → 128
      GLTP; Glycolipid transfer protein (GLTP)
    Nucleotide Protein
    Heading Accession and Version

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