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    D2007.2 MSP domain-containing protein;Major sperm protein [ Caenorhabditis elegans ]

    Gene ID: 183938, updated on 9-Dec-2024

    Summary

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    Official Symbol
    D2007.2
    Official Full Name
    MSP domain-containing protein;Major sperm protein
    Primary source
    WormBase:WBGene00017042
    Locus tag
    CELE_D2007.2
    See related
    AllianceGenome:WB:WBGene00017042
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cytoskeleton. Is expressed in body wall musculature; head; intestine; and nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See D2007.2 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (8148963..8154628)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Large ribosomal subunit protein uL18m Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Autophagy-related protein 13 homolog Neighboring gene Inositol polyphosphate 5-phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MSP domain-containing protein;Major sperm protein
    NP_001317873.1
    • Confirmed by transcript evidence
    NP_001317874.1
    • Confirmed by transcript evidence
    NP_001317875.1
    • Confirmed by transcript evidence
    NP_001367503.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      8148963..8154628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001379822.2 → NP_001367503.1  Major sperm protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34376
      Conserved Domains (1) summary
      pfam00635
      Location:77 → 175
      Motile_Sperm; MSP (Major sperm protein) domain

    2. NM_001330932.3 → NP_001317873.1  Major sperm protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1C3NSP3

    3. NM_001330933.3 → NP_001317874.1  Major sperm protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1C3NSI2

    4. NM_001330934.1 → NP_001317875.1  MSP domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1C3NSM2
      Conserved Domains (1) summary
      cl27657
      Location:1 → 60
      Motile_Sperm; MSP (Major sperm protein) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34376.1

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