TRM26 RB1-inducible coiled-coil protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: TRM26
Official Full Name: RB1-inducible coiled-coil protein
Primary source: TAIR:AT2G17550
Locus tag: AT2G17550
See related: Araport:AT2G17550
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: MJB20.11; MJB20_11; TON1 Recruiting Motif 26
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Genomic context

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See TRM26 in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 5

Sequence:: Chromosome: 2; NC_003071.7 (7634126..7637832, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_001084439.2

Supported by ESTs:

NM_127309.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: RB1-inducible coiled-coil protein

NP_001077908.1

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 215 Blast hits to 205 proteins in 55 species: Archae - 5; Bacteria - 0; Metazoa - 50; Fungi - 10; Plants - 99; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).

NP_179346.2

unknown protein; Has 264 Blast hits to 258 proteins in 65 species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi - 16; Plants - 107; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

7634126..7637832 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_127309.4 → NP_179346.2 RB1-inducible coiled-coil protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_179346.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VZX7, A0A5S9WYR7, A0A654ETN3, F4INJ6

Conserved Domains (2) summary

pfam14309
Location:598 → 769

DUF4378; Domain of unknown function (DUF4378)

cl07879
Location:524 → 581

DnaG_DnaB_bind; DNA primase DnaG DnaB-binding
NM_001084439.2 → NP_001077908.1 RB1-inducible coiled-coil protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001077908.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9WYR7, Q0WL38

Conserved Domains (2) summary

pfam14309
Location:524 → 695

DUF4378; Domain of unknown function (DUF4378)

cl07879
Location:450 → 507

DnaG_DnaB_bind; DNA primase DnaG DnaB-binding